Merge pull request #222 from mailgun/maxim/develop

PIP-1409: Remove version pins from setup.py [python3]

.build/Dockerfile

@@ -0,0 +1,20 @@
+FROM python:3.9-slim-buster AS deps
+
+RUN apt-get update && \
+    apt-get install -y build-essential git curl python3-dev libatlas3-base libatlas-base-dev liblapack-dev libxml2 libxml2-dev libffi6 libffi-dev musl-dev libxslt-dev
+
+FROM deps AS testable
+ARG REPORT_PATH
+
+VOLUME ["/var/mailgun", "/etc/mailgun/ssl", ${REPORT_PATH}]
+
+ADD . /app
+WORKDIR /app
+COPY wheel/* /wheel/
+
+RUN mkdir -p ${REPORT_PATH}
+
+RUN python ./setup.py build bdist_wheel -d /wheel && \
+    pip install --no-deps /wheel/*
+
+ENTRYPOINT ["/bin/sh", "/app/run_tests.sh"]

.gitignore

@@ -54,3 +54,6 @@ _trial_temp
 
 # OSX
 .DS_Store
+
+# vim-backup
+*.bak

MANIFEST.in

@@ -5,3 +5,10 @@ include classifier
 include LICENSE
 include MANIFEST.in
 include README.rst
+include talon/signature/data/train.data
+include talon/signature/data/classifier
+include talon/signature/data/classifier_01.npy
+include talon/signature/data/classifier_02.npy
+include talon/signature/data/classifier_03.npy
+include talon/signature/data/classifier_04.npy
+include talon/signature/data/classifier_05.npy

README.rst

@@ -129,6 +129,22 @@ start using it for talon.
 .. _EDRM: http://www.edrm.net/resources/data-sets/edrm-enron-email-data-set
 .. _forge: https://github.com/mailgun/forge
 
+Training on your dataset
+------------------------
+
+talon comes with a pre-processed dataset and a pre-trained classifier. To retrain the classifier on your own dataset of raw emails, structure and annotate them in the same way the `forge`_ project does. Then do:
+
+.. code:: python
+
+    from talon.signature.learning.dataset import build_extraction_dataset
+    from talon.signature.learning import classifier as c 
+    
+    build_extraction_dataset("/path/to/your/P/folder", "/path/to/talon/signature/data/train.data")
+    c.train(c.init(), "/path/to/talon/signature/data/train.data", "/path/to/talon/signature/data/classifier")
+
+Note that for signature extraction you need just the folder with the positive samples with annotated signature lines (P folder).
+
+.. _forge: https://github.com/mailgun/forge
 
 Research
 --------

requirements.txt

@@ -0,0 +1,11 @@
+chardet>=1.0.1
+cchardet>=0.3.5
+cssselect
+html5lib
+joblib
+lxml>=2.3.3
+numpy
+regex>=1
+scikit-learn>=1.0.0
+scipy
+six>=1.10.0

run_tests.sh

@@ -0,0 +1,4 @@
+#!/usr/bin/env bash
+set -ex
+REPORT_PATH="${REPORT_PATH:-./}"
+nosetests --with-xunit --with-coverage --cover-xml --cover-xml-file $REPORT_PATH/coverage.xml --xunit-file=$REPORT_PATH/nosetests.xml --cover-package=talon .

setup.py

@@ -19,17 +19,17 @@ class InstallCommand(install):
         if self.no_ml:
             dist = self.distribution
             dist.packages=find_packages(exclude=[
-                'tests',
+                "tests",
-                'tests.*',
+                "tests.*",
-                'talon.signature',
+                "talon.signature",
-                'talon.signature.*',
+                "talon.signature.*",
             ])
-            for not_required in ['numpy', 'scipy', 'scikit-learn==0.16.1']:
+            for not_required in ["numpy", "scipy", "scikit-learn==0.24.1"]:
                 dist.install_requires.remove(not_required)
 
 
 setup(name='talon',
-      version='1.4.4',
+      version='1.4.9',
       description=("Mailgun library "
                    "to extract message quotations and signatures."),
       long_description=open("README.rst").read(),
@@ -44,20 +44,21 @@ setup(name='talon',
       include_package_data=True,
       zip_safe=True,
       install_requires=[
-          "lxml>=2.3.3",
+          "lxml",
-          "regex>=1",
+          "regex",
           "numpy",
           "scipy",
-          "scikit-learn>=0.16.1", # pickled versions of classifier, else rebuild
+          "scikit-learn>=1.0.0",
-          'chardet>=1.0.1',
+          "chardet",
-          'cchardet>=0.3.5',
+          "cchardet",
-          'cssselect',
+          "cssselect",
-          'six>=1.10.0',
+          "six",
-          'html5lib'
+          "html5lib",
+          "joblib",
           ],
       tests_require=[
           "mock",
-          "nose>=1.2.1",
+          "nose",
           "coverage"
           ]
       )

talon/html_quotations.py

@@ -87,23 +87,24 @@ def cut_gmail_quote(html_message):
 
 def cut_microsoft_quote(html_message):
     ''' Cuts splitter block and all following blocks. '''
+    #use EXSLT extensions to have a regex match() function with lxml
+    ns = {"re": "http://exslt.org/regular-expressions"}
+
+    #general pattern: @style='border:none;border-top:solid <color> 1.0pt;padding:3.0pt 0<unit> 0<unit> 0<unit>'
+    #outlook 2007, 2010 (international) <color=#B5C4DF> <unit=cm>
+    #outlook 2007, 2010 (american)      <color=#B5C4DF> <unit=pt>
+    #outlook 2013       (international) <color=#E1E1E1> <unit=cm>
+    #outlook 2013       (american)      <color=#E1E1E1> <unit=pt>
+    #also handles a variant with a space after the semicolon
     splitter = html_message.xpath(
-        #outlook 2007, 2010 (international)
+        #outlook 2007, 2010, 2013 (international, american)
-        "//div[@style='border:none;border-top:solid #B5C4DF 1.0pt;"
+        "//div[@style[re:match(., 'border:none; ?border-top:solid #(E1E1E1|B5C4DF) 1.0pt; ?"
-        "padding:3.0pt 0cm 0cm 0cm']|"
+        "padding:3.0pt 0(in|cm) 0(in|cm) 0(in|cm)')]]|"
-        #outlook 2007, 2010 (american)
-        "//div[@style='border:none;border-top:solid #B5C4DF 1.0pt;"
-        "padding:3.0pt 0in 0in 0in']|"
-        #outlook 2013 (international)
-        "//div[@style='border:none;border-top:solid #E1E1E1 1.0pt;"
-        "padding:3.0pt 0cm 0cm 0cm']|"
-        #outlook 2013 (american)
-        "//div[@style='border:none;border-top:solid #E1E1E1 1.0pt;"
-        "padding:3.0pt 0in 0in 0in']|"
         #windows mail
         "//div[@style='padding-top: 5px; "
         "border-top-color: rgb(229, 229, 229); "
         "border-top-width: 1px; border-top-style: solid;']"
+        , namespaces=ns
     )
 
     if splitter:

talon/quotations.py

@@ -22,7 +22,7 @@ import six
 log = logging.getLogger(__name__)
 
 
-RE_FWD = re.compile("^[-]+[ ]*Forwarded message[ ]*[-]+$", re.I | re.M)
+RE_FWD = re.compile("^[-]+[ ]*Forwarded message[ ]*[-]+\s*$", re.I | re.M)
 
 RE_ON_DATE_SMB_WROTE = re.compile(
     u'(-*[>]?[ ]?({0})[ ].*({1})(.*\n){{0,2}}.*({2}):?-*)'.format(
@@ -38,6 +38,8 @@ RE_ON_DATE_SMB_WROTE = re.compile(
             'Op',
             # German
             'Am',
+            # Portuguese
+            'Em',
             # Norwegian
             u'På',
             # Swedish, Danish
@@ -64,6 +66,8 @@ RE_ON_DATE_SMB_WROTE = re.compile(
             'schreef','verzond','geschreven',
             # German
             'schrieb',
+            # Portuguese
+            'escreveu',
             # Norwegian, Swedish
             'skrev',
             # Vietnamese
@@ -135,13 +139,17 @@ RE_ORIGINAL_MESSAGE = re.compile(u'[\s]*[-]+[ ]*({})[ ]*[-]+'.format(
         'Oprindelig meddelelse',
     ))), re.I)
 
-RE_FROM_COLON_OR_DATE_COLON = re.compile(u'(_+\r?\n)?[\s]*(:?[*]?{})[\s]?:[*]?.*'.format(
+RE_FROM_COLON_OR_DATE_COLON = re.compile(u'((_+\r?\n)?[\s]*:?[*]?({})[\s]?:([^\n$]+\n){{1,2}}){{2,}}'.format(
     u'|'.join((
         # "From" in different languages.
         'From', 'Van', 'De', 'Von', 'Fra', u'Från',
         # "Date" in different languages.
-        'Date', 'Datum', u'Envoyé', 'Skickat', 'Sendt',
+        'Date', '[S]ent', 'Datum', u'Envoyé', 'Skickat', 'Sendt', 'Gesendet',
-    ))), re.I)
+        # "Subject" in different languages.
+        'Subject', 'Betreff', 'Objet', 'Emne', u'Ämne',
+        # "To" in different languages.
+        'To', 'An', 'Til', u'À', 'Till'
+    ))), re.I | re.M)
 
 # ---- John Smith wrote ----
 RE_ANDROID_WROTE = re.compile(u'[\s]*[-]+.*({})[ ]*[-]+'.format(
@@ -165,15 +173,15 @@ SPLITTER_PATTERNS = [
     RE_FROM_COLON_OR_DATE_COLON,
     # 02.04.2012 14:20 пользователь "bob@example.com" <
     # bob@xxx.mailgun.org> написал:
-    re.compile("(\d+/\d+/\d+|\d+\.\d+\.\d+).*@", re.S),
+    re.compile("(\d+/\d+/\d+|\d+\.\d+\.\d+).*\s\S+@\S+", re.S),
     # 2014-10-17 11:28 GMT+03:00 Bob <
     # bob@example.com>:
-    re.compile("\d{4}-\d{2}-\d{2}\s+\d{2}:\d{2}\s+GMT.*@", re.S),
+    re.compile("\d{4}-\d{2}-\d{2}\s+\d{2}:\d{2}\s+GMT.*\s\S+@\S+", re.S),
     # Thu, 26 Jun 2014 14:00:51 +0400 Bob <bob@example.com>:
     re.compile('\S{3,10}, \d\d? \S{3,10} 20\d\d,? \d\d?:\d\d(:\d\d)?'
                '( \S+){3,6}@\S+:'),
     # Sent from Samsung MobileName <address@example.com> wrote:
-    re.compile('Sent from Samsung .*@.*> wrote'),
+    re.compile('Sent from Samsung.* \S+@\S+> wrote'),
     RE_ANDROID_WROTE,
     RE_POLYMAIL
     ]
@@ -286,7 +294,7 @@ def process_marked_lines(lines, markers, return_flags=[False, -1, -1]):
     # inlined reply
     # use lookbehind assertions to find overlapping entries e.g. for 'mtmtm'
     # both 't' entries should be found
-    for inline_reply in re.finditer('(?<=m)e*((?:t+e*)+)m', markers):
+    for inline_reply in re.finditer('(?<=m)e*(t[te]*)m', markers):
         # long links could break sequence of quotation lines but they shouldn't
         # be considered an inline reply
         links = (
@@ -430,6 +438,9 @@ def _extract_from_html(msg_body):
     Extract not quoted message from provided html message body
     using tags and plain text algorithm.
 
+    Cut out first some encoding html tags such as xml and doctype
+    for avoiding conflict with unicode decoding
+
     Cut out the 'blockquote', 'gmail_quote' tags.
     Cut Microsoft quotations.
 
@@ -445,6 +456,9 @@ def _extract_from_html(msg_body):
         return msg_body
 
     msg_body = msg_body.replace(b'\r\n', b'\n')
+
+    msg_body = re.sub(br"\<\?xml.+\?\>|\<\!DOCTYPE.+]\>", "", msg_body)
+
     html_tree = html_document_fromstring(msg_body)
 
     if html_tree is None:
@@ -502,9 +516,69 @@ def _extract_from_html(msg_body):
     if _readable_text_empty(html_tree_copy):
         return msg_body
 
+    # NOTE: We remove_namespaces() because we are using an HTML5 Parser, HTML
+    # parsers do not recognize namespaces in HTML tags. As such the rendered
+    # HTML tags are no longer recognizable HTML tags. Example: <o:p> becomes
+    # <oU0003Ap>. When we port this to golang we should look into using an
+    # XML Parser NOT and HTML5 Parser since we do not know what input a
+    # customer will send us. Switching to a common XML parser in python
+    # opens us up to a host of vulnerabilities.
+    # See https://docs.python.org/3/library/xml.html#xml-vulnerabilities
+    #
+    # The down sides to removing the namespaces is that customers might
+    # judge the XML namespaces important. If that is the case then support
+    # should encourage customers to preform XML parsing of the un-stripped
+    # body to get the full unmodified XML payload.
+    #
+    # Alternatives to this approach are
+    # 1. Ignore the U0003A in tag names and let the customer deal with it.
+    #    This is not ideal, as most customers use stripped-html for viewing
+    #    emails sent from a recipient, as such they cannot control the HTML
+    #    provided by a recipient.
+    # 2. Preform a string replace of 'U0003A' to ':' on the rendered HTML
+    #    string. While this would solve the issue simply, it runs the risk
+    #    of replacing data outside the <tag> which might be essential to
+    #    the customer.
+    remove_namespaces(html_tree_copy)
     return html.tostring(html_tree_copy)
 
 
+def remove_namespaces(root):
+    """
+    Given the root of an HTML document iterate through all the elements
+    and remove any namespaces that might have been provided and remove
+    any attributes that contain a namespace
+
+    <html xmlns:o="urn:schemas-microsoft-com:office:office">
+    becomes
+    <html>
+
+    <o:p>Hi</o:p>
+    becomes
+    <p>Hi</p>
+
+    Start tags do NOT have a namespace; COLON characters have no special meaning.
+    if we don't remove the namespace the parser translates the tag name into a
+    unicode representation. For example <o:p> becomes <oU0003Ap>
+
+    See https://www.w3.org/TR/2011/WD-html5-20110525/syntax.html#start-tags
+
+
+    """
+    for child in root.iter():
+        for key, value in child.attrib.items():
+            # If the attribute includes a colon
+            if key.rfind("U0003A") != -1:
+                child.attrib.pop(key)
+
+        # If the tag includes a colon
+        idx = child.tag.rfind("U0003A")
+        if idx != -1:
+            child.tag = child.tag[idx+6:]
+
+    return root
+
+
 def split_emails(msg):
     """
     Given a message (which may consist of an email conversation thread with
@@ -557,7 +631,6 @@ def _correct_splitlines_in_headers(markers, lines):
     updated_markers = ""
     i = 0
     in_header_block = False
-
     for m in markers:
         # Only set in_header_block flag when we hit an 's' and line is a header
         if m == 's':

talon/signature/data/__init__.py

@@ -0,0 +1 @@
+

talon/signature/learning/classifier.py

@@ -8,7 +8,7 @@ body belongs to the signature.
 from __future__ import absolute_import
 
 from numpy import genfromtxt
-from sklearn.externals import joblib
+import joblib
 from sklearn.svm import LinearSVC
 
 

talon/utils.py

@@ -131,7 +131,7 @@ def html_tree_to_text(tree):
     for el in tree.iter():
         el_text = (el.text or '') + (el.tail or '')
         if len(el_text) > 1:
-            if el.tag in _BLOCKTAGS:
+            if el.tag in _BLOCKTAGS + _HARDBREAKS:
                 text += "\n"
             if el.tag == 'li':
                 text += "  * "
@@ -142,7 +142,8 @@ def html_tree_to_text(tree):
             if href:
                 text += "(%s) " % href
 
-        if el.tag in _HARDBREAKS and text and not text.endswith("\n"):
+        if (el.tag in _HARDBREAKS and text and
+            not text.endswith("\n") and not el_text):
             text += "\n"
 
     retval = _rm_excessive_newlines(text)

test-requirements.txt

@@ -0,0 +1,3 @@
+coverage
+mock
+nose>=1.2.1

tests/html_quotations_test.py

@@ -8,6 +8,7 @@ import re
 from talon import quotations, utils as u
 from . import *
 from .fixtures import *
+from lxml import html
 
 RE_WHITESPACE = re.compile("\s")
 RE_DOUBLE_WHITESPACE = re.compile("\s")
@@ -424,3 +425,23 @@ def test_readable_html_empty():
 def test_bad_html():
     bad_html = "<html></html>"
     eq_(bad_html, quotations.extract_from_html(bad_html))
+
+
+def test_remove_namespaces():
+    msg_body = """
+    <html xmlns:o="urn:schemas-microsoft-com:office:office" xmlns="http://www.w3.org/TR/REC-html40">
+        <body>
+            <o:p>Dear Sir,</o:p>
+            <o:p>Thank you for the email.</o:p>
+            <blockquote>thing</blockquote>
+        </body>
+    </html>
+    """
+
+    rendered = quotations.extract_from_html(msg_body)
+
+    assert_true("<p>" in rendered)
+    assert_true("xmlns" in rendered)
+
+    assert_true("<o:p>" not in rendered)
+    assert_true("<xmlns:o>" not in rendered)

tests/text_quotations_test.py

@@ -119,6 +119,38 @@ On 11-Apr-2011, at 6:54 PM, Roman Tkachenko <romant@example.com> sent:
     eq_("Test reply", quotations.extract_from_plain(msg_body))
 
 
+def test_appointment():
+    msg_body = """Response
+
+10/19/2017 @ 9:30 am for physical therapy
+Bla
+1517 4th Avenue Ste 300
+London CA 19129, 555-421-6780
+
+John Doe, FCLS
+Mailgun Inc
+555-941-0697
+
+From: from@example.com [mailto:from@example.com]
+Sent: Wednesday, October 18, 2017 2:05 PM
+To: John Doer - SIU <jd@example.com>
+Subject: RE: Claim # 5551188-1
+
+Text"""
+
+    expected = """Response
+
+10/19/2017 @ 9:30 am for physical therapy
+Bla
+1517 4th Avenue Ste 300
+London CA 19129, 555-421-6780
+
+John Doe, FCLS
+Mailgun Inc
+555-941-0697"""
+    eq_(expected, quotations.extract_from_plain(msg_body))
+
+
 def test_line_starts_with_on():
     msg_body = """Blah-blah-blah
 On blah-blah-blah"""
@@ -421,6 +453,7 @@ def test_link_closed_with_quotation_marker_on_new_line():
     msg_body = '''8.45am-1pm
 
 From: somebody@example.com
+Date: Wed, 16 May 2012 00:15:02 -0600
  
 <http://email.example.com/c/dHJhY2tpbmdfY29kZT1mMDdjYzBmNzM1ZjYzMGIxNT
 >  <bob@example.com <mailto:bob@example.com> >
@@ -462,7 +495,9 @@ def test_from_block_starts_with_date():
     msg_body = """Blah
 
 Date: Wed, 16 May 2012 00:15:02 -0600
-To: klizhentas@example.com"""
+To: klizhentas@example.com
+
+"""
     eq_('Blah', quotations.extract_from_plain(msg_body))
 
 
@@ -532,11 +567,12 @@ def test_mark_message_lines():
              # next line should be marked as splitter
              '_____________',
              'From: foo@bar.com',
+             'Date: Wed, 16 May 2012 00:15:02 -0600',
              '',
              '> Hi',
              '',
              'Signature']
-    eq_('tessemet', quotations.mark_message_lines(lines))
+    eq_('tesssemet', quotations.mark_message_lines(lines))
 
     lines = ['Just testing the email reply',
              '',
@@ -775,7 +811,7 @@ def test_split_email():
         >
         >
 """
-    expected_markers = "stttttsttttetesetesmmmmmmssmmmmmmsmmmmmmmm"
+    expected_markers = "stttttsttttetesetesmmmmmmsmmmmmmmmmmmmmmmm"
     markers = quotations.split_emails(msg)
     eq_(markers, expected_markers)
 
@@ -790,4 +826,16 @@ The user experience was unparallelled. Please continue production. I'm sending p
 that this line is intact."""
 
     parsed = quotations.extract_from_plain(msg_body)
-    eq_(msg_body, parsed.decode('utf8'))
+    eq_(msg_body, parsed)
+
+
+def test_appointment_2():
+    msg_body = """Invitation for an interview:
+
+Date: Wednesday 3, October 2011 
+Time: 7 : 00am 
+Address: 130 Fox St
+
+Please bring in your ID."""
+    parsed = quotations.extract_from_plain(msg_body)
+    eq_(msg_body, parsed)